arXiv:2411.06635v4 Announce Type: replace-cross Abstract: Single-cell RNA sequencing enables high-resolution analysis of cellular heterogeneity, yet disentangling biological signal from batch effects remains a major challenge. Existing batch-correction algorithms suppress or discard batch-related variation rather than modeling it. We propose scMEDAL, single-cell Mixed Effects Deep Autoencoder Learning, a framework that separately models batch-invariant and batch-specific effects […]

arXiv:2502.15835v3 Announce Type: replace-cross Abstract: Large Language Models (LLMs) have demonstrated impressive potential in translating natural language (NL) instructions into program code. However, user instructions often contain inherent ambiguities, making it challenging for LLMs to generate code that accurately reflects the user’s true intent. To address this challenge, researchers have proposed approaches that produce multiple […]

arXiv:2504.04737v2 Announce Type: replace-cross Abstract: In the landscape of Fact-based Judgment Prediction and Explanation (FJPE), reliance on factual data is essential for developing robust and realistic AI-driven decision-making tools. This paper introduces TathyaNyaya, the largest annotated dataset for FJPE tailored to the Indian legal context, encompassing judgments from the Supreme Court of India and various […]

arXiv:2505.13567v2 Announce Type: replace-cross Abstract: Recurrent neural networks (RNNs) trained on neuroscience-inspired tasks offer powerful models of brain computation. However, typical training paradigms rely on open-loop, supervised settings, whereas real-world learning unfolds in closed-loop environments. Here, we develop a mathematical theory describing the learning dynamics of linear RNNs trained in closed-loop contexts. We first demonstrate […]

arXiv:2505.19853v3 Announce Type: replace-cross Abstract: Properly evaluating the ability of Video-Language Models (VLMs) to understand long videos remains a challenge. We propose a long-context video understanding benchmark, Causal2Needles, that assesses two crucial abilities insufficiently addressed by existing benchmarks: (1) extracting information from two separate locations (two needles) in a long video and understanding them jointly, […]

arXiv:2511.04235v1 Announce Type: new Abstract: Sharing and reconstructing a consistent spatial memory is a critical challenge in multi-agent systems, where partial observability and limited bandwidth often lead to catastrophic failures in coordination. We introduce a multi-agent predictive coding framework that formulate coordination as the minimization of mutual uncertainty among agents. Instantiated as an information bottleneck […]