Experiments in Agentic AI for Science

arXiv:2605.26305v1 Announce Type: new Abstract: This paper details two novel frameworks for developing autonomous, agentic AI in scientific workflows. Both systems leverage a hybrid Local

arXiv:2508.13663v5 Announce Type: replace
Abstract: Methods for query answering over incomplete knowledge graphs retrieve entities that are likely to be answers, which is particularly useful when such answers cannot be reached by direct graph traversal due to missing edges. However, existing approaches have focused on queries formalized using first-order-logic. In practice, many real-world queries involve constraints that are inherently vague or context-dependent, such as preferences for attributes or related categories. Addressing this gap, we introduce the problem of query answering with soft constraints. We formalize the problem and introduce two efficient methods designed to adjust query answer scores by incorporating soft constraints without disrupting the original answers to a query. These methods are lightweight, requiring tuning only two parameters or a small neural network trained to capture soft constraints while maintaining the original ranking structure. To evaluate the task, we extend existing QA benchmarks by generating datasets with soft constraints. Our experiments demonstrate that our methods can capture soft constraints while maintaining robust query answering performance and adding very little overhead. With our work, we explore a new and flexible way to interact with graph databases that allows users to specify their preferences by providing examples interactively.

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